STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT01228.1AraC-type DNA-binding protein. (306 aa)    
Predicted Functional Partners:
SFS55929.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.799
SFS55408.1
AraC-type DNA-binding protein.
  
     0.771
SFT02708.1
AraC-like ligand binding domain-containing protein.
  
   0.703
SFT17069.1
Glutamate synthase (ferredoxin).
    
  0.659
SFT01212.1
Hypothetical protein.
       0.580
SFT11625.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
  
  0.567
SFT01243.1
Methylamine utilisation protein MauE.
       0.541
SFT01258.1
Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.541
SFS55943.1
Signal transduction histidine kinase.
   
 
 0.528
SFT02441.1
AraC-type DNA-binding protein.
  
     0.509
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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