STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT02933.1Isoquinoline 1-oxidoreductase, alpha subunit. (154 aa)    
Predicted Functional Partners:
SFT02918.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.999
SFT08939.1
Xanthine and CO dehydrogenase maturation factor, XdhC/CoxF family.
 
 
 0.897
SFT08962.1
Molybdenum cofactor cytidylyltransferase.
 
 
 0.892
SFT11625.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
   
 0.709
SFS41153.1
Nicotinamidase/pyrazinamidase.
     
 0.661
SFS55929.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.589
SFS86039.1
Cytosine/adenosine deaminase.
  
 
 0.527
SFS96268.1
Hypothetical protein.
    
  0.494
SFT02898.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
    
  0.480
SFS88070.1
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.
    
 0.479
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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