Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS35922.1 | SFS55929.1 | SAMN04487906_0146 | SAMN04487906_0871 | Carbon-nitrogen hydrolase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.874 |
SFS35922.1 | SFT03613.1 | SAMN04487906_0146 | SAMN04487906_2642 | Carbon-nitrogen hydrolase. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.862 |
SFS35922.1 | mdh | SAMN04487906_0146 | SAMN04487906_2319 | Carbon-nitrogen hydrolase. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.857 |
SFS53217.1 | SFS55929.1 | SAMN04487906_0716 | SAMN04487906_0871 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.863 |
SFS53217.1 | SFT03613.1 | SAMN04487906_0716 | SAMN04487906_2642 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.997 |
SFS53217.1 | mdh | SAMN04487906_0716 | SAMN04487906_2319 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.442 |
SFS53217.1 | nadA | SAMN04487906_0716 | SAMN04487906_2643 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.999 |
SFS53217.1 | panD | SAMN04487906_0716 | SAMN04487906_1594 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.494 |
SFS53217.1 | purA | SAMN04487906_0716 | SAMN04487906_0548 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.491 |
SFS55929.1 | SFS35922.1 | SAMN04487906_0871 | SAMN04487906_0146 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Carbon-nitrogen hydrolase. | 0.874 |
SFS55929.1 | SFS53217.1 | SAMN04487906_0871 | SAMN04487906_0716 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | 0.863 |
SFS55929.1 | SFS63725.1 | SAMN04487906_0871 | SAMN04487906_1062 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Aspartate kinase. | 0.458 |
SFS55929.1 | SFT03613.1 | SAMN04487906_0871 | SAMN04487906_2642 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.896 |
SFS55929.1 | fumC | SAMN04487906_0871 | SAMN04487906_2465 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.947 |
SFS55929.1 | mdh | SAMN04487906_0871 | SAMN04487906_2319 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.995 |
SFS55929.1 | purA | SAMN04487906_0871 | SAMN04487906_0548 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.412 |
SFS63725.1 | SFS55929.1 | SAMN04487906_1062 | SAMN04487906_0871 | Aspartate kinase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.458 |
SFS63725.1 | SFT03613.1 | SAMN04487906_1062 | SAMN04487906_2642 | Aspartate kinase. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.888 |
SFS63725.1 | SFT12093.1 | SAMN04487906_1062 | SAMN04487906_3056 | Aspartate kinase. | L-asparaginase. | 0.872 |
SFS63725.1 | fumC | SAMN04487906_1062 | SAMN04487906_2465 | Aspartate kinase. | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.713 |
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