STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT07796.1Hypothetical protein. (187 aa)    
Predicted Functional Partners:
SFT07816.1
Hypothetical protein.
 
     0.947
SFS85024.1
Hypothetical protein.
 
     0.777
SFS85052.1
Type IV secretion-system coupling protein DNA-binding domain-containing protein.
 
     0.777
SFS84172.1
Protein of unknown function.
  
     0.773
SFS84102.1
Bacteroides conjugation system ATPase, TraG family.
  
     0.772
SFS84152.1
Hypothetical protein.
  
     0.772
SFS84186.1
Protein of unknown function.
  
     0.772
SFS84020.1
Hypothetical protein.
  
     0.721
SFS84010.1
Hypothetical protein.
  
     0.695
SFS55319.1
SusD family protein.
  
     0.678
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.