Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS41816.1 | SFT09706.1 | SAMN04487906_0397 | SAMN04487906_2928 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.606 |
SFS41816.1 | SFT09859.1 | SAMN04487906_0397 | SAMN04487906_2938 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Peptidase family M48. | 0.695 |
SFT02172.1 | SFT09859.1 | SAMN04487906_2558 | SAMN04487906_2938 | Outer membrane protein OmpA. | Peptidase family M48. | 0.424 |
SFT09706.1 | SFS41816.1 | SAMN04487906_2928 | SAMN04487906_0397 | His Kinase A (phospho-acceptor) domain-containing protein. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.606 |
SFT09706.1 | SFT09859.1 | SAMN04487906_2928 | SAMN04487906_2938 | His Kinase A (phospho-acceptor) domain-containing protein. | Peptidase family M48. | 0.442 |
SFT09706.1 | ribB | SAMN04487906_2928 | SAMN04487906_0794 | His Kinase A (phospho-acceptor) domain-containing protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.928 |
SFT09843.1 | SFT09859.1 | SAMN04487906_2937 | SAMN04487906_2938 | Pimeloyl-ACP methyl ester carboxylesterase. | Peptidase family M48. | 0.517 |
SFT09859.1 | SFS41816.1 | SAMN04487906_2938 | SAMN04487906_0397 | Peptidase family M48. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.695 |
SFT09859.1 | SFT02172.1 | SAMN04487906_2938 | SAMN04487906_2558 | Peptidase family M48. | Outer membrane protein OmpA. | 0.424 |
SFT09859.1 | SFT09706.1 | SAMN04487906_2938 | SAMN04487906_2928 | Peptidase family M48. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.442 |
SFT09859.1 | SFT09843.1 | SAMN04487906_2938 | SAMN04487906_2937 | Peptidase family M48. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.517 |
SFT09859.1 | ribB | SAMN04487906_2938 | SAMN04487906_0794 | Peptidase family M48. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.698 |
ribB | SFT09706.1 | SAMN04487906_0794 | SAMN04487906_2928 | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.928 |
ribB | SFT09859.1 | SAMN04487906_0794 | SAMN04487906_2938 | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | Peptidase family M48. | 0.698 |