STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT12652.1Thioredoxin-like. (443 aa)    
Predicted Functional Partners:
SFT12736.1
SusD family protein.
 
 
   0.893
SFT12749.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.834
SFT12664.1
Thioredoxin.
 
    
0.795
SFT12683.1
Thioredoxin.
 
    
0.765
SFT06415.1
Endoglycosylceramidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
  0.755
SFS54333.1
SusD family protein.
  
     0.747
SFS72163.1
Starch-binding associating with outer membrane.
  
 
   0.732
SFS68007.1
SusD family protein.
  
 
   0.727
SFT12634.1
Zinc protease.
 
     0.698
SFT12695.1
Predicted Zn-dependent peptidase.
 
     0.689
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.