STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT12808.1alpha-L-fucosidase 2. (799 aa)    
Predicted Functional Partners:
SFS40075.1
alpha-L-fucosidase.
  
  
  0.775
SFS54664.1
alpha-L-fucosidase.
  
  
  0.739
SFS76506.1
Alpha galactosidase A.
  
     0.727
SFS40100.1
Alpha-L-fucosidase.
  
  0.717
SFS85500.1
alpha-L-fucosidase.
  
  
  0.700
SFS68338.1
Alpha-L-fucosidase.
  
  
  0.698
SFS68364.1
alpha-L-fucosidase.
  
  
  0.696
SFS68430.1
alpha-L-fucosidase.
  
  
  0.696
SFS85473.1
alpha-L-fucosidase; Manually curated.
  
  0.672
SFS93033.1
alpha-L-fucosidase.
  
  0.671
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.