STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT17039.1Outer membrane transport energization protein ExbB. (229 aa)    
Predicted Functional Partners:
SFT17031.1
Biopolymer transport protein ExbD.
 
 
 0.989
SFT17023.1
Hypothetical protein.
 
 
 0.968
SFT12055.1
Biopolymer transport protein ExbD.
 
 
 0.858
SFT12044.1
Biopolymer transport protein ExbD.
 
 
 0.848
SFT17014.1
Dihydrofolate synthase / folylpolyglutamate synthase.
     
 0.839
SFT11570.1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.827
SFT11555.1
Protein TonB.
 
 
 0.780
SFS91251.1
Biopolymer transport protein ExbD/TolR.
  
 
 0.777
SFS77463.1
Hypothetical protein.
 
 
 0.737
SFT17047.1
Na+/H+ antiporter NhaD.
       0.678
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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