STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT17167.1Protein of unknown function. (251 aa)    
Predicted Functional Partners:
SFT17159.1
Protein of unknown function.
    
0.983
SFT17177.1
Tat (twin-arginine translocation) pathway signal sequence.
 
     0.917
SFS55929.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.859
SFS39351.1
Predicted dehydrogenase.
 
     0.769
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.757
SFS78044.1
Protein of unknown function.
 
     0.745
SFS54460.1
Predicted dehydrogenase.
 
     0.733
SFS78876.1
Choline dehydrogenase.
 
     0.654
SFT17186.1
Concanavalin A-like lectin/glucanases superfamily protein.
 
     0.630
SFS78857.1
Gluconate 2-dehydrogenase subunit 3.
 
     0.611
Your Current Organism:
Zhouia amylolytica
NCBI taxonomy Id: 376730
Other names: CGMCC 1.6114, Flavobacteriaceae bacterium HN-171, Flavobacteriaceae bacterium HN-172, Flavobacteriaceae bacterium HN-181, JCM 14016, Z. amylolytica, Zhouia amylolytica Liu et al. 2006, strain HN-171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.