Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA43886.1 | SFA43890.1 | SAMN04487972_103123 | SAMN04487972_103124 | ATP-dependent DNA helicase, Rep family. | Protein of unknown function. | 0.547 |
SFA43886.1 | SFA43901.1 | SAMN04487972_103123 | SAMN04487972_103127 | ATP-dependent DNA helicase, Rep family. | Cell division protein FtsW; Belongs to the SEDS family. | 0.660 |
SFA43886.1 | murC | SAMN04487972_103123 | SAMN04487972_103125 | ATP-dependent DNA helicase, Rep family. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.612 |
SFA43886.1 | murG | SAMN04487972_103123 | SAMN04487972_103126 | ATP-dependent DNA helicase, Rep family. | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.614 |
SFA43890.1 | SFA43886.1 | SAMN04487972_103124 | SAMN04487972_103123 | Protein of unknown function. | ATP-dependent DNA helicase, Rep family. | 0.547 |
SFA43890.1 | SFA43901.1 | SAMN04487972_103124 | SAMN04487972_103127 | Protein of unknown function. | Cell division protein FtsW; Belongs to the SEDS family. | 0.780 |
SFA43890.1 | SFA43907.1 | SAMN04487972_103124 | SAMN04487972_103128 | Protein of unknown function. | Hypothetical protein. | 0.497 |
SFA43890.1 | metAA | SAMN04487972_103124 | SAMN04487972_103129 | Protein of unknown function. | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. | 0.497 |
SFA43890.1 | murC | SAMN04487972_103124 | SAMN04487972_103125 | Protein of unknown function. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.780 |
SFA43890.1 | murG | SAMN04487972_103124 | SAMN04487972_103126 | Protein of unknown function. | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.780 |
SFA43901.1 | SFA43886.1 | SAMN04487972_103127 | SAMN04487972_103123 | Cell division protein FtsW; Belongs to the SEDS family. | ATP-dependent DNA helicase, Rep family. | 0.660 |
SFA43901.1 | SFA43890.1 | SAMN04487972_103127 | SAMN04487972_103124 | Cell division protein FtsW; Belongs to the SEDS family. | Protein of unknown function. | 0.780 |
SFA43901.1 | SFA43907.1 | SAMN04487972_103127 | SAMN04487972_103128 | Cell division protein FtsW; Belongs to the SEDS family. | Hypothetical protein. | 0.497 |
SFA43901.1 | metAA | SAMN04487972_103127 | SAMN04487972_103129 | Cell division protein FtsW; Belongs to the SEDS family. | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. | 0.497 |
SFA43901.1 | murC | SAMN04487972_103127 | SAMN04487972_103125 | Cell division protein FtsW; Belongs to the SEDS family. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.995 |
SFA43901.1 | murG | SAMN04487972_103127 | SAMN04487972_103126 | Cell division protein FtsW; Belongs to the SEDS family. | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.995 |
SFA43907.1 | SFA43890.1 | SAMN04487972_103128 | SAMN04487972_103124 | Hypothetical protein. | Protein of unknown function. | 0.497 |
SFA43907.1 | SFA43901.1 | SAMN04487972_103128 | SAMN04487972_103127 | Hypothetical protein. | Cell division protein FtsW; Belongs to the SEDS family. | 0.497 |
SFA43907.1 | metAA | SAMN04487972_103128 | SAMN04487972_103129 | Hypothetical protein. | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. | 0.901 |
SFA43907.1 | murC | SAMN04487972_103128 | SAMN04487972_103125 | Hypothetical protein. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.497 |
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