Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA42270.1 | SFA44349.1 | SAMN04487972_102278 | SAMN04487972_103196 | Sensor histidine kinase inhibitor, KipI family. | Transcriptional regulator, IclR family. | 0.937 |
SFA42270.1 | SFA61426.1 | SAMN04487972_102278 | SAMN04487972_1369 | Sensor histidine kinase inhibitor, KipI family. | Sensor histidine kinase inhibitor, KipI family. | 0.999 |
SFA44343.1 | SFA44349.1 | SAMN04487972_103195 | SAMN04487972_103196 | Hypothetical protein. | Transcriptional regulator, IclR family. | 0.456 |
SFA44349.1 | SFA42270.1 | SAMN04487972_103196 | SAMN04487972_102278 | Transcriptional regulator, IclR family. | Sensor histidine kinase inhibitor, KipI family. | 0.937 |
SFA44349.1 | SFA44343.1 | SAMN04487972_103196 | SAMN04487972_103195 | Transcriptional regulator, IclR family. | Hypothetical protein. | 0.456 |
SFA44349.1 | SFA44356.1 | SAMN04487972_103196 | SAMN04487972_103197 | Transcriptional regulator, IclR family. | Serine-glyoxylate aminotransferase apoenzyme. | 0.623 |
SFA44349.1 | SFA44365.1 | SAMN04487972_103196 | SAMN04487972_103198 | Transcriptional regulator, IclR family. | Threonine dehydratase. | 0.632 |
SFA44349.1 | SFA44371.1 | SAMN04487972_103196 | SAMN04487972_103199 | Transcriptional regulator, IclR family. | D-3-hydroxyaspartate aldolase. | 0.705 |
SFA44349.1 | SFA44380.1 | SAMN04487972_103196 | SAMN04487972_103200 | Transcriptional regulator, IclR family. | Ornithine cyclodeaminase. | 0.665 |
SFA44349.1 | SFA44387.1 | SAMN04487972_103196 | SAMN04487972_103201 | Transcriptional regulator, IclR family. | Permease family protein. | 0.478 |
SFA44349.1 | SFA58054.1 | SAMN04487972_103196 | SAMN04487972_11943 | Transcriptional regulator, IclR family. | Phosphate butyryltransferase. | 0.411 |
SFA44349.1 | SFA61426.1 | SAMN04487972_103196 | SAMN04487972_1369 | Transcriptional regulator, IclR family. | Sensor histidine kinase inhibitor, KipI family. | 0.937 |
SFA44349.1 | SFA62251.1 | SAMN04487972_103196 | SAMN04487972_14612 | Transcriptional regulator, IclR family. | DNA-binding transcriptional regulator, FadR family. | 0.452 |
SFA44356.1 | SFA44349.1 | SAMN04487972_103197 | SAMN04487972_103196 | Serine-glyoxylate aminotransferase apoenzyme. | Transcriptional regulator, IclR family. | 0.623 |
SFA44356.1 | SFA44365.1 | SAMN04487972_103197 | SAMN04487972_103198 | Serine-glyoxylate aminotransferase apoenzyme. | Threonine dehydratase. | 0.973 |
SFA44356.1 | SFA44371.1 | SAMN04487972_103197 | SAMN04487972_103199 | Serine-glyoxylate aminotransferase apoenzyme. | D-3-hydroxyaspartate aldolase. | 0.898 |
SFA44356.1 | SFA44380.1 | SAMN04487972_103197 | SAMN04487972_103200 | Serine-glyoxylate aminotransferase apoenzyme. | Ornithine cyclodeaminase. | 0.982 |
SFA44356.1 | SFA44387.1 | SAMN04487972_103197 | SAMN04487972_103201 | Serine-glyoxylate aminotransferase apoenzyme. | Permease family protein. | 0.659 |
SFA44365.1 | SFA44349.1 | SAMN04487972_103198 | SAMN04487972_103196 | Threonine dehydratase. | Transcriptional regulator, IclR family. | 0.632 |
SFA44365.1 | SFA44356.1 | SAMN04487972_103198 | SAMN04487972_103197 | Threonine dehydratase. | Serine-glyoxylate aminotransferase apoenzyme. | 0.973 |
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