STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA43491.1Type IV secretion system protein VirB10. (379 aa)    
Predicted Functional Partners:
SFA43484.1
Type IV secretion system protein VirB9.
 
  0.984
SFA43478.1
Type IV secretion system protein VirB5.
 
  
  0.964
SFA43475.1
Type IV secretion system protein TrbL.
 
  
  0.963
SFA43458.1
Type IV secretion system protein VirB4.
 
 
  0.962
SFA43463.1
P-type conjugative transfer protein TrbJ.
 
  
  0.952
SFA58638.1
Type IV secretion system protein VirB9.
 
  0.933
SFA59401.1
Type IV secretion system protein VirB9.
 
  0.933
SFA43446.1
Type IV secretion system protein VirB2.
 
  
  0.930
SFA43451.1
Type IV secretion system protein VirB3.
 
  
  0.930
SFA43496.1
Hypothetical protein.
 
     0.919
Your Current Organism:
Paracoccus halophilus
NCBI taxonomy Id: 376733
Other names: CGMCC 1.6117, JCM 14014, Paracoccus halophilus Liu et al. 2008, Paracoccus sp. HN-182, strain HN-182
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.