Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA40783.1 | SFA43556.1 | SAMN04487972_10234 | SAMN04487972_10354 | benzoyl-CoA oxygenase, component A. | TIGR01244 family protein. | 0.639 |
SFA40783.1 | SFA43630.1 | SAMN04487972_10234 | SAMN04487972_10367 | benzoyl-CoA oxygenase, component A. | Sulfide:quinone oxidoreductase. | 0.590 |
SFA40783.1 | SFA56842.1 | SAMN04487972_10234 | SAMN04487972_11612 | benzoyl-CoA oxygenase, component A. | Phosphopantetheine attachment site. | 0.563 |
SFA40783.1 | SFA61744.1 | SAMN04487972_10234 | SAMN04487972_1402 | benzoyl-CoA oxygenase, component A. | Hypothetical protein. | 0.758 |
SFA40783.1 | sseA | SAMN04487972_10234 | SAMN04487972_11252 | benzoyl-CoA oxygenase, component A. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.664 |
SFA43556.1 | SFA40783.1 | SAMN04487972_10354 | SAMN04487972_10234 | TIGR01244 family protein. | benzoyl-CoA oxygenase, component A. | 0.639 |
SFA43556.1 | SFA43562.1 | SAMN04487972_10354 | SAMN04487972_10355 | TIGR01244 family protein. | 1-Cys peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | 0.683 |
SFA43556.1 | SFA43574.1 | SAMN04487972_10354 | SAMN04487972_10357 | TIGR01244 family protein. | Rhodanese-related sulfurtransferase. | 0.645 |
SFA43556.1 | SFA43630.1 | SAMN04487972_10354 | SAMN04487972_10367 | TIGR01244 family protein. | Sulfide:quinone oxidoreductase. | 0.604 |
SFA43556.1 | SFA47599.1 | SAMN04487972_10354 | SAMN04487972_105106 | TIGR01244 family protein. | tRNA 2-thiouridine synthesizing protein A; Belongs to the sulfur carrier protein TusA family. | 0.620 |
SFA43556.1 | SFA56837.1 | SAMN04487972_10354 | SAMN04487972_11611 | TIGR01244 family protein. | Amino acid adenylation domain-containing protein. | 0.633 |
SFA43556.1 | SFA56842.1 | SAMN04487972_10354 | SAMN04487972_11612 | TIGR01244 family protein. | Phosphopantetheine attachment site. | 0.612 |
SFA43556.1 | SFA57367.1 | SAMN04487972_10354 | SAMN04487972_11740 | TIGR01244 family protein. | Cysteine desulfurase. | 0.623 |
SFA43556.1 | SFA61744.1 | SAMN04487972_10354 | SAMN04487972_1402 | TIGR01244 family protein. | Hypothetical protein. | 0.735 |
SFA43556.1 | sseA | SAMN04487972_10354 | SAMN04487972_11252 | TIGR01244 family protein. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.627 |
SFA43562.1 | SFA43556.1 | SAMN04487972_10355 | SAMN04487972_10354 | 1-Cys peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | TIGR01244 family protein. | 0.683 |
SFA43562.1 | SFA56842.1 | SAMN04487972_10355 | SAMN04487972_11612 | 1-Cys peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | Phosphopantetheine attachment site. | 0.564 |
SFA43574.1 | SFA43556.1 | SAMN04487972_10357 | SAMN04487972_10354 | Rhodanese-related sulfurtransferase. | TIGR01244 family protein. | 0.645 |
SFA43574.1 | SFA43630.1 | SAMN04487972_10357 | SAMN04487972_10367 | Rhodanese-related sulfurtransferase. | Sulfide:quinone oxidoreductase. | 0.502 |
SFA43574.1 | SFA47599.1 | SAMN04487972_10357 | SAMN04487972_105106 | Rhodanese-related sulfurtransferase. | tRNA 2-thiouridine synthesizing protein A; Belongs to the sulfur carrier protein TusA family. | 0.501 |
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