STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA47829.1Glycosyltransferase family 29 (sialyltransferase). (204 aa)    
Predicted Functional Partners:
SFA47822.1
Mannosyltransferase.
 
   
 0.851
SFA43876.1
Hypothetical protein.
  
  
 0.648
SFA59087.1
Ribosomal protein S18 acetylase RimI.
  
     0.644
SFA54347.1
Hypothetical protein.
  
     0.620
SFA47839.1
Conserved hypothetical protein.
 
     0.618
SFA58960.1
Flagellar hook-associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family.
  
    0.613
SFA56323.1
Hypothetical protein.
  
     0.610
SFA45568.1
Hypothetical protein.
  
     0.588
SFA46116.1
Uncharacterized conserved protein YgiB, involved in bioifilm formation, UPF0441/DUF1190 family.
  
     0.587
SFA41999.1
Cell division and transport-associated protein TolA.
  
    0.575
Your Current Organism:
Paracoccus halophilus
NCBI taxonomy Id: 376733
Other names: CGMCC 1.6117, JCM 14014, Paracoccus halophilus Liu et al. 2008, Paracoccus sp. HN-182, strain HN-182
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.