STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA47304.1phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (433 aa)    
Predicted Functional Partners:
SFA47277.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.999
SFA47285.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.998
SFA58416.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.997
SFA50354.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
 0.972
SFA58419.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.971
SFA47310.1
Cholesterol transport system auxiliary component.
 
  0.966
SFA50360.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 0.946
SFA56459.1
Phospholipid transport system substrate-binding protein.
  
 0.941
SFA45502.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
     
 0.901
SFA58428.1
Cholesterol transport system auxiliary component.
 
  0.869
Your Current Organism:
Paracoccus halophilus
NCBI taxonomy Id: 376733
Other names: CGMCC 1.6117, JCM 14014, Paracoccus halophilus Liu et al. 2008, Paracoccus sp. HN-182, strain HN-182
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.