STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA50137.1Xaa-Pro aminopeptidase. (605 aa)    
Predicted Functional Partners:
SFA56972.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 0.684
SFA44152.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
  
 0.669
SFA50141.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.666
SFA60522.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 0.643
SFA54651.1
N-alpha-acetyl-L-2,4-diaminobutyrate deacetylase.
    
 0.625
ectC
Ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant.
    
  0.595
SFA54967.1
Creatinine amidohydrolase.
    
  0.594
SFA50145.1
Cobaltochelatase CobT subunit.
 
     0.586
SFA50133.1
Protein of unknown function.
     
 0.538
SFA50155.1
Cobaltochelatase CobS subunit.
 
     0.529
Your Current Organism:
Paracoccus halophilus
NCBI taxonomy Id: 376733
Other names: CGMCC 1.6117, JCM 14014, Paracoccus halophilus Liu et al. 2008, Paracoccus sp. HN-182, strain HN-182
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.