STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA51119.1Histidine phosphotransferase ChpT. (217 aa)    
Predicted Functional Partners:
SFA45851.1
Two-component system, cell cycle response regulator CtrA.
  
 0.975
SFA61193.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
  
 0.975
SFA46131.1
Two-component system, OmpR family, response regulator.
   
 0.867
SFA57812.1
Two-component system, OmpR family, response regulator TctD.
   
 0.867
SFA39723.1
Signal transduction histidine kinase.
   
  0.799
SFA53815.1
Hypothetical protein.
   
  0.787
SFA47852.1
PAS domain-containing protein.
  
 0.768
SFA39574.1
PAS domain S-box-containing protein.
   
 0.756
SFA51114.1
Protein of unknown function.
       0.721
SFA48775.1
Signal transduction histidine kinase.
   
  0.699
Your Current Organism:
Paracoccus halophilus
NCBI taxonomy Id: 376733
Other names: CGMCC 1.6117, JCM 14014, Paracoccus halophilus Liu et al. 2008, Paracoccus sp. HN-182, strain HN-182
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