STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA51230.1Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL. (390 aa)    
Predicted Functional Partners:
SFA51236.1
Two-component system, NtrC family, nitrogen regulation response regulator GlnG.
 0.999
SFA56121.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
  
 0.993
SFA51245.1
Two-component system, NtrC family, nitrogen regulation response regulator NtrX.
 0.968
SFA61193.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
 
0.963
SFA51224.1
tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
 
  
 0.936
SFA48564.1
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.
 0.934
SFA48775.1
Signal transduction histidine kinase.
 
 
 0.903
SFA51242.1
PAS/PAC sensor signal transduction histidine kinase.
 
  
0.867
SFA39723.1
Signal transduction histidine kinase.
 
 
0.863
SFA39574.1
PAS domain S-box-containing protein.
   
 0.859
Your Current Organism:
Paracoccus halophilus
NCBI taxonomy Id: 376733
Other names: CGMCC 1.6117, JCM 14014, Paracoccus halophilus Liu et al. 2008, Paracoccus sp. HN-182, strain HN-182
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.