STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuAD-mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (402 aa)    
Predicted Functional Partners:
SFA52945.1
2-dehydro-3-deoxygluconokinase.
 
  
 0.970
uxaC
Glucuronate isomerase.
 
  
 0.953
SFA52929.1
Fructuronate reductase.
 
 
 0.932
SFA52937.1
Altronate hydrolase.
 
 
 0.902
SFA52956.1
DNA-binding transcriptional regulator, GntR family.
 
   
 0.813
SFA56545.1
Ribose 5-phosphate isomerase B.
   
 
  0.734
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
  
 0.627
kduI-2
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
  
 0.625
SFA49911.1
L-fucose dehydrogenase.
  
 
  0.510
SFA38883.1
Glucose 1-dehydrogenase.
  
 
  0.499
Your Current Organism:
Paracoccus halophilus
NCBI taxonomy Id: 376733
Other names: CGMCC 1.6117, JCM 14014, Paracoccus halophilus Liu et al. 2008, Paracoccus sp. HN-182, strain HN-182
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