Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA38044.1 | SFA50016.1 | SAMN04487972_10170 | SAMN04487972_10766 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.995 |
SFA38044.1 | SFA55200.1 | SAMN04487972_10170 | SAMN04487972_11356 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Hypothetical protein. | 0.600 |
SFA38044.1 | SFA55423.1 | SAMN04487972_10170 | SAMN04487972_11391 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | 0.685 |
SFA38044.1 | SFA55428.1 | SAMN04487972_10170 | SAMN04487972_11392 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Formate C-acetyltransferase. | 0.881 |
SFA38044.1 | SFA55433.1 | SAMN04487972_10170 | SAMN04487972_11393 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Formate C-acetyltransferase. | 0.881 |
SFA38044.1 | SFA61072.1 | SAMN04487972_10170 | SAMN04487972_1336 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.995 |
SFA38044.1 | ackA-2 | SAMN04487972_10170 | SAMN04487972_12052 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.837 |
SFA38044.1 | mdh | SAMN04487972_10170 | SAMN04487972_102166 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.921 |
SFA50016.1 | SFA38044.1 | SAMN04487972_10766 | SAMN04487972_10170 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.995 |
SFA50016.1 | SFA55200.1 | SAMN04487972_10766 | SAMN04487972_11356 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Hypothetical protein. | 0.545 |
SFA50016.1 | SFA55423.1 | SAMN04487972_10766 | SAMN04487972_11391 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | 0.455 |
SFA50016.1 | SFA55428.1 | SAMN04487972_10766 | SAMN04487972_11392 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Formate C-acetyltransferase. | 0.785 |
SFA50016.1 | SFA55433.1 | SAMN04487972_10766 | SAMN04487972_11393 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Formate C-acetyltransferase. | 0.785 |
SFA50016.1 | SFA61072.1 | SAMN04487972_10766 | SAMN04487972_1336 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.906 |
SFA50016.1 | ackA-2 | SAMN04487972_10766 | SAMN04487972_12052 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.934 |
SFA50016.1 | mdh | SAMN04487972_10766 | SAMN04487972_102166 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.966 |
SFA55200.1 | SFA38044.1 | SAMN04487972_11356 | SAMN04487972_10170 | Hypothetical protein. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.600 |
SFA55200.1 | SFA50016.1 | SAMN04487972_11356 | SAMN04487972_10766 | Hypothetical protein. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.545 |
SFA55200.1 | SFA55423.1 | SAMN04487972_11356 | SAMN04487972_11391 | Hypothetical protein. | Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | 0.754 |
SFA55200.1 | SFA55428.1 | SAMN04487972_11356 | SAMN04487972_11392 | Hypothetical protein. | Formate C-acetyltransferase. | 0.620 |
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