Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA48052.1 | SFA56639.1 | SAMN04487972_105189 | SAMN04487972_11570 | Ferredoxin-NADP reductase. | Rieske 2Fe-2S family protein. | 0.890 |
SFA48052.1 | SFA56665.1 | SAMN04487972_105189 | SAMN04487972_11577 | Ferredoxin-NADP reductase. | Hypothetical protein. | 0.780 |
SFA48052.1 | SFA56972.1 | SAMN04487972_105189 | SAMN04487972_11644 | Ferredoxin-NADP reductase. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.673 |
SFA48052.1 | SFA56977.1 | SAMN04487972_105189 | SAMN04487972_11645 | Ferredoxin-NADP reductase. | Sarcosine oxidase subunit delta. | 0.422 |
SFA49286.1 | SFA49290.1 | SAMN04487972_106167 | SAMN04487972_106168 | Benzoate/toluate 1,2-dioxygenase beta subunit. | Benzoate/toluate 1,2-dioxygenase reductase subunit. | 0.988 |
SFA49286.1 | SFA54053.1 | SAMN04487972_106167 | SAMN04487972_111112 | Benzoate/toluate 1,2-dioxygenase beta subunit. | Ferredoxin-NADP reductase. | 0.835 |
SFA49286.1 | SFA56639.1 | SAMN04487972_106167 | SAMN04487972_11570 | Benzoate/toluate 1,2-dioxygenase beta subunit. | Rieske 2Fe-2S family protein. | 0.943 |
SFA49286.1 | SFA56643.1 | SAMN04487972_106167 | SAMN04487972_11571 | Benzoate/toluate 1,2-dioxygenase beta subunit. | Ferredoxin-NADP reductase. | 0.835 |
SFA49290.1 | SFA49286.1 | SAMN04487972_106168 | SAMN04487972_106167 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | Benzoate/toluate 1,2-dioxygenase beta subunit. | 0.988 |
SFA49290.1 | SFA54053.1 | SAMN04487972_106168 | SAMN04487972_111112 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | Ferredoxin-NADP reductase. | 0.827 |
SFA49290.1 | SFA56639.1 | SAMN04487972_106168 | SAMN04487972_11570 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | Rieske 2Fe-2S family protein. | 0.623 |
SFA49290.1 | SFA56643.1 | SAMN04487972_106168 | SAMN04487972_11571 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | Ferredoxin-NADP reductase. | 0.819 |
SFA49290.1 | SFA56646.1 | SAMN04487972_106168 | SAMN04487972_11572 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.442 |
SFA49290.1 | SFA56665.1 | SAMN04487972_106168 | SAMN04487972_11577 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | Hypothetical protein. | 0.730 |
SFA49290.1 | SFA56972.1 | SAMN04487972_106168 | SAMN04487972_11644 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.888 |
SFA54053.1 | SFA49286.1 | SAMN04487972_111112 | SAMN04487972_106167 | Ferredoxin-NADP reductase. | Benzoate/toluate 1,2-dioxygenase beta subunit. | 0.835 |
SFA54053.1 | SFA49290.1 | SAMN04487972_111112 | SAMN04487972_106168 | Ferredoxin-NADP reductase. | Benzoate/toluate 1,2-dioxygenase reductase subunit. | 0.827 |
SFA54053.1 | SFA56639.1 | SAMN04487972_111112 | SAMN04487972_11570 | Ferredoxin-NADP reductase. | Rieske 2Fe-2S family protein. | 0.935 |
SFA54053.1 | SFA56643.1 | SAMN04487972_111112 | SAMN04487972_11571 | Ferredoxin-NADP reductase. | Ferredoxin-NADP reductase. | 0.586 |
SFA54053.1 | SFA56665.1 | SAMN04487972_111112 | SAMN04487972_11577 | Ferredoxin-NADP reductase. | Hypothetical protein. | 0.852 |
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