STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA57822.1Putative transposase. (80 aa)    
Predicted Functional Partners:
SFA57824.1
Integrase core domain-containing protein.
     0.990
SFA57820.1
Transposase.
 
     0.836
SFA58279.1
Integrase core domain-containing protein.
 
     0.752
SFA60342.1
Transposase.
  
     0.743
SFA60339.1
Putative transposase.
 
     0.742
SFA62775.1
Putative transposase.
 
     0.732
SFA39739.1
Transposase InsO and inactivated derivatives.
 
     0.617
SFA38787.1
Transposase.
 
     0.457
SFA39734.1
Transposase.
 
     0.435
Your Current Organism:
Paracoccus halophilus
NCBI taxonomy Id: 376733
Other names: CGMCC 1.6117, JCM 14014, Paracoccus halophilus Liu et al. 2008, Paracoccus sp. HN-182, strain HN-182
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.