STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA58400.1Hypothetical protein. (103 aa)    
Predicted Functional Partners:
SFA58396.1
Replication protein C N-terminal domain-containing protein.
 
     0.923
SFA58391.1
Hypothetical protein.
 
     0.852
SFA61873.1
Type IV secretion system protein VirB3.
 
     0.786
SFA61876.1
Type IV secretion system protein VirB2.
 
     0.784
SFA61855.1
Type IV secretion system protein VirB8.
 
     0.774
SFA61859.1
Type IV secretion system protein VirB5.
 
     0.774
SFA61844.1
Type IV secretion system protein VirB6.
 
     0.774
SFA62693.1
Type IV secretion system protein VirD4.
  
     0.774
SFA58349.1
Type IV secretion system protein VirB5.
 
     0.773
SFA62525.1
Relaxase/Mobilisation nuclease domain-containing protein.
  
     0.772
Your Current Organism:
Paracoccus halophilus
NCBI taxonomy Id: 376733
Other names: CGMCC 1.6117, JCM 14014, Paracoccus halophilus Liu et al. 2008, Paracoccus sp. HN-182, strain HN-182
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.