STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA59545.1Protein of unknown function. (123 aa)    
Predicted Functional Partners:
SFA59541.1
Hypothetical protein.
       0.777
SFA59536.1
Hypothetical protein.
       0.773
SFA59812.1
Hypothetical protein.
  
     0.675
SFA61788.1
Hypothetical protein.
  
     0.674
SFA58633.1
Conjugative transfer region protein TrbK.
  
     0.666
SFA43468.1
Conjugative transfer region protein TrbK.
  
     0.664
SFA59413.1
Conjugative transfer region protein TrbK.
  
     0.577
SFA62644.1
Protein of unknown function.
     0.552
SFA59579.1
Hypothetical protein.
 
     0.542
SFA58667.1
Protein of unknown function.
     0.540
Your Current Organism:
Paracoccus halophilus
NCBI taxonomy Id: 376733
Other names: CGMCC 1.6117, JCM 14014, Paracoccus halophilus Liu et al. 2008, Paracoccus sp. HN-182, strain HN-182
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.