Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA38269.1 | SFA53097.1 | SAMN04487972_101110 | SAMN04487972_11085 | Phosphate acetyltransferase. | Isocitrate lyase. | 0.607 |
SFA38269.1 | ackA-2 | SAMN04487972_101110 | SAMN04487972_12052 | Phosphate acetyltransferase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.961 |
SFA38269.1 | ackA-3 | SAMN04487972_101110 | SAMN04487972_13025 | Phosphate acetyltransferase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.971 |
SFA38269.1 | acsA | SAMN04487972_101110 | SAMN04487972_104177 | Phosphate acetyltransferase. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.919 |
SFA38269.1 | prpE | SAMN04487972_101110 | SAMN04487972_10765 | Phosphate acetyltransferase. | propionyl-CoA synthetase. | 0.729 |
SFA50016.1 | SFA53097.1 | SAMN04487972_10766 | SAMN04487972_11085 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Isocitrate lyase. | 0.912 |
SFA50016.1 | SFA58054.1 | SAMN04487972_10766 | SAMN04487972_11943 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Phosphate butyryltransferase. | 0.721 |
SFA50016.1 | SFA60686.1 | SAMN04487972_10766 | SAMN04487972_13023 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Phosphate acetyltransferase. | 0.721 |
SFA50016.1 | SFA61072.1 | SAMN04487972_10766 | SAMN04487972_1336 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.906 |
SFA50016.1 | ackA-2 | SAMN04487972_10766 | SAMN04487972_12052 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.934 |
SFA50016.1 | ackA-3 | SAMN04487972_10766 | SAMN04487972_13025 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.811 |
SFA50016.1 | acsA | SAMN04487972_10766 | SAMN04487972_104177 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.777 |
SFA50016.1 | prpE | SAMN04487972_10766 | SAMN04487972_10765 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | propionyl-CoA synthetase. | 0.869 |
SFA53097.1 | SFA38269.1 | SAMN04487972_11085 | SAMN04487972_101110 | Isocitrate lyase. | Phosphate acetyltransferase. | 0.607 |
SFA53097.1 | SFA50016.1 | SAMN04487972_11085 | SAMN04487972_10766 | Isocitrate lyase. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.912 |
SFA53097.1 | SFA58054.1 | SAMN04487972_11085 | SAMN04487972_11943 | Isocitrate lyase. | Phosphate butyryltransferase. | 0.738 |
SFA53097.1 | SFA60686.1 | SAMN04487972_11085 | SAMN04487972_13023 | Isocitrate lyase. | Phosphate acetyltransferase. | 0.738 |
SFA53097.1 | SFA61072.1 | SAMN04487972_11085 | SAMN04487972_1336 | Isocitrate lyase. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.912 |
SFA53097.1 | ackA-2 | SAMN04487972_11085 | SAMN04487972_12052 | Isocitrate lyase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.645 |
SFA53097.1 | ackA-3 | SAMN04487972_11085 | SAMN04487972_13025 | Isocitrate lyase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.645 |
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