STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA62671.1Protein of unknown function. (179 aa)    
Predicted Functional Partners:
SFA58400.1
Hypothetical protein.
  
     0.651
SFA61000.1
Replication initiation protein RepC.
  
     0.632
SFA61873.1
Type IV secretion system protein VirB3.
  
     0.567
SFA62693.1
Type IV secretion system protein VirD4.
  
     0.566
SFA62525.1
Relaxase/Mobilisation nuclease domain-containing protein.
  
     0.564
SFA62672.1
Chromosome partitioning protein, ParB family.
 
     0.553
SFA61855.1
Type IV secretion system protein VirB8.
  
     0.510
SFA62529.1
Helix-turn-helix domain-containing protein.
  
     0.510
SFA58391.1
Hypothetical protein.
  
     0.504
SFA61844.1
Type IV secretion system protein VirB6.
  
     0.494
Your Current Organism:
Paracoccus halophilus
NCBI taxonomy Id: 376733
Other names: CGMCC 1.6117, JCM 14014, Paracoccus halophilus Liu et al. 2008, Paracoccus sp. HN-182, strain HN-182
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.