STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFOL_v3_29120LTP_2 domain-containing protein. (113 aa)    
Predicted Functional Partners:
CFOL_v3_29228
Uncharacterized protein.
      
 0.501
CFOL_v3_31767
AMP-binding domain-containing protein/PQQ_2 domain-containing protein.
     
 0.488
CFOL_v3_35216
AMP-binding domain-containing protein/PQQ_2 domain-containing protein.
     
 0.488
CFOL_v3_25778
Epimerase domain-containing protein.
   
 
 0.450
CFOL_v3_08696
DUF296 domain-containing protein.
      
 0.418
CFOL_v3_12609
ATG13 domain-containing protein.
   
 0.410
CFOL_v3_18641
ATG13 domain-containing protein.
   
 0.410
Your Current Organism:
Cephalotus follicularis
NCBI taxonomy Id: 3775
Other names: C. follicularis, Cephalotus follicularis Labill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.