Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IW18_08045Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)    
Predicted Functional Partners:
IW18_14980
Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.695
IW18_08050
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.671
IW18_11040
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.593
IW18_21705
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.593
IW18_13470
Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.577
IW18_17745
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.571
IW18_17750
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.571
IW18_18720
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.571
IW18_20150
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.563
IW18_03500
Pyrrolo-quinoline quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.562
Your Current Organism:
Flavobacterium hibernum
NCBI taxonomy Id: 37752
Other names: ACAM 376, ATCC 51468, CIP 105745, DSM 12611, F. hibernum, NCTC 13514
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