Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IW18_09005Heparinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (657 aa)    
Predicted Functional Partners:
IW18_09010
Heparinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.775
IW18_09015
Secretion protein Por; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.669
IW18_08980
Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.630
IW18_21195
Alpha-rhamnosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.587
IW18_16550
CDP-alcohol phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.517
IW18_09025
Glucuronyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.508
IW18_00490
Arylsulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.440
Your Current Organism:
Flavobacterium hibernum
NCBI taxonomy Id: 37752
Other names: ACAM 376, ATCC 51468, CIP 105745, DSM 12611, F. hibernum, NCTC 13514
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.