STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IW18_10890Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (502 aa)    
Predicted Functional Partners:
IW18_12250
acyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.820
IW18_13885
uroporphyrinogen-III synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.758
IW18_06835
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.712
IW18_19395
Flavodoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.712
IW18_14985
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.664
IW18_10895
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.634
IW18_11945
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.619
IW18_02110
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
   
 0.613
IW18_06560
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
   
 0.613
IW18_08725
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.613
Your Current Organism:
Flavobacterium hibernum
NCBI taxonomy Id: 37752
Other names: ACAM 376, ATCC 51468, CIP 105745, DSM 12611, F. hibernum, NCTC 13514
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