STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IW18_11735Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)    
Predicted Functional Partners:
IW18_18490
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.972
lepA
Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
    
  0.900
IW18_02945
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.880
IW18_11740
Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.820
IW18_11590
Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.782
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 0.723
IW18_21000
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.718
IW18_09215
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.681
IW18_09225
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.681
IW18_06925
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.655
Your Current Organism:
Flavobacterium hibernum
NCBI taxonomy Id: 37752
Other names: ACAM 376, ATCC 51468, CIP 105745, DSM 12611, F. hibernum, NCTC 13514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.