STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IW18_16090Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (876 aa)    
Predicted Functional Partners:
IW18_18345
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.954
IW18_16095
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
       0.628
IW18_10785
ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.552
IW18_16085
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.510
IW18_21630
Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
  0.474
IW18_16100
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.431
IW18_16105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.431
IW18_20295
FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.431
IW18_13605
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.402
IW18_15635
Tungsten formylmethanofuran dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.402
Your Current Organism:
Flavobacterium hibernum
NCBI taxonomy Id: 37752
Other names: ACAM 376, ATCC 51468, CIP 105745, DSM 12611, F. hibernum, NCTC 13514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.