STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IW18_18335Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)    
Predicted Functional Partners:
IW18_05210
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.869
IW18_06770
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.744
IW18_08875
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.704
IW18_08225
Beta-mannanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.664
IW18_22340
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.636
IW18_22330
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
   0.602
IW18_06710
Carbohydrate-binding protein SusD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.573
IW18_08270
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.572
IW18_00860
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.563
IW18_19290
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.550
Your Current Organism:
Flavobacterium hibernum
NCBI taxonomy Id: 37752
Other names: ACAM 376, ATCC 51468, CIP 105745, DSM 12611, F. hibernum, NCTC 13514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.