STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IW18_21205DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (70 aa)    
Predicted Functional Partners:
IW18_08075
Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
    
 0.675
IW18_16915
Zeta toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.640
IW18_17010
Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.519
IW18_17015
Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.519
IW18_21200
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.516
IW18_02600
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.506
IW18_04690
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.454
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
    
 0.451
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
  0.443
IW18_02775
DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.435
Your Current Organism:
Flavobacterium hibernum
NCBI taxonomy Id: 37752
Other names: ACAM 376, ATCC 51468, CIP 105745, DSM 12611, F. hibernum, NCTC 13514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.