STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACR13584.1Identified by match to protein family HMM PF06629. (371 aa)    
Predicted Functional Partners:
ACR11285.1
Putative integral membrane sensor signal transduction histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
 
     0.843
ACR14267.1
Conserved hypothetical protein.
  
     0.741
ACR13432.1
TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01782.
  
     0.732
ACR12447.1
Transcriptional regulatory protein RstA; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 
     0.715
ACR11849.1
Peptidoglycan-binding LysM.
       0.701
ACR14330.1
General secretion pathway protein M; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.644
gspH
General secretion pathway protein H; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR01708; match to protein family HMM TIGR02532.
  
     0.641
ACR14424.1
Conserved hypothetical protein.
  
     0.637
ACR13640.1
Tetratricopeptide repeat domain protein.
  
     0.629
ACR11760.1
Putative lipoprotein.
  
     0.628
Your Current Organism:
Teredinibacter turnerae T7901
NCBI taxonomy Id: 377629
Other names: T. turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.