STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRH_03160Putative NADPH oxidoreductase. (350 aa)    
Predicted Functional Partners:
KRH_03150
acyl-CoA desaturase; Protein synonym:steroyl-CoA delta(9)-desaturase.
 
 0.999
KRH_21570
Cytochrome P450; Protein synonym:fatty acid hydroxylase.
  
 0.837
fadH
2,4-dienoyl-CoA reductase.
 
 0.818
KRH_01550
Putative ferredoxin--NADP(+) reductase.
   
 0.698
gltD
Glutamate synthase small subunit; Protein synonym:glutamine 2-oxoglutarate aminotransferase.
   
 0.698
sirA
Sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 
 0.695
iscS
Cysteine desulfurase.
  
 0.689
iscS-2
Cysteine desulfurase.
  
 0.689
trxB
Thioredoxin reductase.
   
 
 0.684
KRH_04470
Putative FAD-linked oxidase.
  
  
 0.576
Your Current Organism:
Kocuria rhizophila
NCBI taxonomy Id: 378753
Other names: K. rhizophila DC2201, Kocuria rhizophila ATCC 9341, Kocuria rhizophila DC2201, Kocuria rhizophila DSM 348, Kocuria rhizophila NBRC 103217, Kocuria rhizophila str. DC2201, Kocuria rhizophila strain DC2201, Micrococcus luteus ATCC 9341
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