STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRH_03490Hypothetical membrane protein. (419 aa)    
Predicted Functional Partners:
KRH_03480
Hypothetical membrane protein.
 
     0.951
KRH_03500
Putative two-component response regulator.
 
 
 0.894
KRH_00490
Hypothetical membrane protein.
  
     0.709
KRH_20440
Hypothetical protein.
 
    0.675
KRH_16370
Hypothetical membrane protein.
  
     0.672
KRH_20120
Hypothetical protein.
  
     0.672
KRH_18970
Hypothetical membrane protein.
  
     0.646
KRH_03510
Hypothetical membrane protein.
 
     0.640
KRH_21280
Hypothetical protein.
  
    0.620
KRH_20510
Hypothetical protein.
  
     0.604
Your Current Organism:
Kocuria rhizophila
NCBI taxonomy Id: 378753
Other names: K. rhizophila DC2201, Kocuria rhizophila ATCC 9341, Kocuria rhizophila DC2201, Kocuria rhizophila DSM 348, Kocuria rhizophila NBRC 103217, Kocuria rhizophila str. DC2201, Kocuria rhizophila strain DC2201, Micrococcus luteus ATCC 9341
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.