STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRH_08050Putative peptide ABC transporter peptide-binding protein. (595 aa)    
Predicted Functional Partners:
KRH_08060
Putative peptide ABC transporter permease protein.
 
 0.995
KRH_08090
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.972
KRH_19650
Putative ABC transporter permease protein.
 
 0.972
KRH_19640
Putative ABC transporter permease protein.
 
 0.967
KRH_19630
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.949
KRH_08070
Putative peptide ABC transporter permease protein.
 
 
 0.934
KRH_21010
Putative peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.933
KRH_10170
Putative ABC transporter substrate-binding protein.
  
  
 
0.918
KRH_19660
Putative ABC transporter substrate-binding protein.
  
  
 
0.915
KRH_08080
Hypothetical membrane protein.
 
     0.723
Your Current Organism:
Kocuria rhizophila
NCBI taxonomy Id: 378753
Other names: K. rhizophila DC2201, Kocuria rhizophila ATCC 9341, Kocuria rhizophila DC2201, Kocuria rhizophila DSM 348, Kocuria rhizophila NBRC 103217, Kocuria rhizophila str. DC2201, Kocuria rhizophila strain DC2201, Micrococcus luteus ATCC 9341
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.