Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRH_04540 | KRH_08740 | KRH_04540 | KRH_08740 | Putative S1C family peptidase. | S1C family peptidase. | 0.776 |
KRH_04540 | KRH_15510 | KRH_04540 | KRH_15510 | Putative S1C family peptidase. | Hypothetical protein. | 0.476 |
KRH_04540 | arc | KRH_04540 | KRH_13880 | Putative S1C family peptidase. | Putative ATPase. | 0.827 |
KRH_04540 | glpK | KRH_04540 | KRH_13500 | Putative S1C family peptidase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.686 |
KRH_04540 | rplT | KRH_04540 | KRH_15650 | Putative S1C family peptidase. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.466 |
KRH_08730 | KRH_08740 | KRH_08730 | KRH_08740 | Hypothetical protein. | S1C family peptidase. | 0.524 |
KRH_08740 | KRH_04540 | KRH_08740 | KRH_04540 | S1C family peptidase. | Putative S1C family peptidase. | 0.776 |
KRH_08740 | KRH_08730 | KRH_08740 | KRH_08730 | S1C family peptidase. | Hypothetical protein. | 0.524 |
KRH_08740 | KRH_15510 | KRH_08740 | KRH_15510 | S1C family peptidase. | Hypothetical protein. | 0.540 |
KRH_08740 | KRH_18340 | KRH_08740 | KRH_18340 | S1C family peptidase. | Two-component histidine kinase. | 0.601 |
KRH_08740 | arc | KRH_08740 | KRH_13880 | S1C family peptidase. | Putative ATPase. | 0.827 |
KRH_08740 | clpP | KRH_08740 | KRH_11080 | S1C family peptidase. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.568 |
KRH_08740 | clpP-2 | KRH_08740 | KRH_11090 | S1C family peptidase. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.543 |
KRH_08740 | glpK | KRH_08740 | KRH_13500 | S1C family peptidase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.686 |
KRH_08740 | rplI | KRH_08740 | KRH_23360 | S1C family peptidase. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.507 |
KRH_08740 | rplT | KRH_08740 | KRH_15650 | S1C family peptidase. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.505 |
KRH_15510 | KRH_04540 | KRH_15510 | KRH_04540 | Hypothetical protein. | Putative S1C family peptidase. | 0.476 |
KRH_15510 | KRH_08740 | KRH_15510 | KRH_08740 | Hypothetical protein. | S1C family peptidase. | 0.540 |
KRH_15510 | arc | KRH_15510 | KRH_13880 | Hypothetical protein. | Putative ATPase. | 0.788 |
KRH_15510 | glpK | KRH_15510 | KRH_13500 | Hypothetical protein. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.760 |
page 1 of 3