STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRH_12580UDP-N-acetyl-D-mannosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (415 aa)    
Predicted Functional Partners:
KRH_12670
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
 0.997
KRH_12520
Hypothetical protein.
 
  
 0.771
KRH_12570
Hypothetical protein.
 
  
 0.760
KRH_12530
Putative glycosyltransferase.
 
  
 0.675
KRH_12600
Putative glycosyltransferase.
 
  
 0.651
KRH_12560
Putative ABC transporter ATP-binding protein.
  
  
 0.633
KRH_12640
Hypothetical protein.
 
  
 0.600
KRH_11450
Putative non-ribosomal peptide synthetase.
  
  
 0.551
rmlB
Putative dTDP-glucose 4,6-dehydratase.
  
  
 0.545
KRH_12550
Putative ABC transporter permease protein.
  
  
 0.482
Your Current Organism:
Kocuria rhizophila
NCBI taxonomy Id: 378753
Other names: K. rhizophila DC2201, Kocuria rhizophila ATCC 9341, Kocuria rhizophila DC2201, Kocuria rhizophila DSM 348, Kocuria rhizophila NBRC 103217, Kocuria rhizophila str. DC2201, Kocuria rhizophila strain DC2201, Micrococcus luteus ATCC 9341
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