STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgC-2Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (414 aa)    
Predicted Functional Partners:
glgP
Putative glycogen phosphorylase.
 
 
 0.978
KRH_18670
Putative glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.976
KRH_12730
Putative glycosyltransferase.
 
  
 0.965
malQ
4-alpha-glucanotransferase; Protein synonym:amylomaltase.
 
  
 0.955
galU
UTP--glucose-1-phosphate uridylyltransferase; Protein synonym:UDP-glucose pyrophosphorylase.
     
 0.937
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
  
 0.935
pgm
Phosphoglucomutase; Protein synonym:glucose phosphomutase.
    
 0.931
glgC
Glucose-1-phosphate adenylyltransferase; Protein synonym:ADP-glucose pyrophosphorylase; protein synonym:ADP-glucose synthase.
  
  
 
0.922
otsA
Protein synonym:trehalose-6-phosphate synthase.
     
 0.874
treZ
Malto-oligosyltrehalose trehalohydrolase.
 
  
 0.790
Your Current Organism:
Kocuria rhizophila
NCBI taxonomy Id: 378753
Other names: K. rhizophila DC2201, Kocuria rhizophila ATCC 9341, Kocuria rhizophila DC2201, Kocuria rhizophila DSM 348, Kocuria rhizophila NBRC 103217, Kocuria rhizophila str. DC2201, Kocuria rhizophila strain DC2201, Micrococcus luteus ATCC 9341
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