STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadH2,4-dienoyl-CoA reductase. (712 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase large subunit; Protein synonym:glutamine 2-oxoglutarate aminotransferase.
  
 
 0.999
KRH_22720
Putative electron transfer flavoprotein beta subunit.
  
 
 0.980
KRH_22710
Putative electron transfer flavoprotein alpha subunit.
  
 
 0.882
KRH_18440
Hypothetical protein.
  
 
 0.866
KRH_03160
Putative NADPH oxidoreductase.
 
 0.818
paaE
Putative phenylacetate-CoA oxygenase subunit PaaE; Protein synonym:phenylacetic acid degradation protein.
  
 0.775
KRH_03130
2Fe-2S ferredoxin.
   
 0.696
KRH_04470
Putative FAD-linked oxidase.
  
  
 0.692
fadB
Fatty oxidation complex alpha subunit; Multifunctional protein.
  
  
 0.656
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
 0.578
Your Current Organism:
Kocuria rhizophila
NCBI taxonomy Id: 378753
Other names: K. rhizophila DC2201, Kocuria rhizophila ATCC 9341, Kocuria rhizophila DC2201, Kocuria rhizophila DSM 348, Kocuria rhizophila NBRC 103217, Kocuria rhizophila str. DC2201, Kocuria rhizophila strain DC2201, Micrococcus luteus ATCC 9341
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