STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDZ44_07205Unannotated protein. (298 aa)    
Predicted Functional Partners:
DDZ44_07220
Unannotated protein.
  
 0.977
panB
Unannotated protein; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
 
  
 0.956
panD
Unannotated protein; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
 
     0.604
folK
Unannotated protein.
       0.544
folB
Unannotated protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.455
folP
Unannotated protein.
       0.440
DDZ44_03960
Unannotated protein; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
    
  0.439
Your Current Organism:
Syntrophomonas wolfei methylbutyratica
NCBI taxonomy Id: 378794
Other names: CGMCC 1.5051, JCM 14075, S. wolfei subsp. methylbutyratica, Syntrophomonas wolfei subsp. methylbutyratica, strain 4J5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.