Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDZ44_02335 | DDZ44_02350 | GCA_001570625_01442 | GCA_001570625_01445 | Unannotated protein. | Unannotated protein. | 0.682 |
DDZ44_02335 | GCA_001570625_02711 | GCA_001570625_01442 | GCA_001570625_02711 | Unannotated protein. | Unannotated protein. | 0.777 |
DDZ44_02335 | folD | GCA_001570625_01442 | GCA_001570625_00653 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.833 |
DDZ44_02335 | gcvH | GCA_001570625_01442 | GCA_001570625_01440 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.999 |
DDZ44_02335 | gcvPA | GCA_001570625_01442 | GCA_001570625_01441 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.999 |
DDZ44_02335 | gcvT | GCA_001570625_01442 | GCA_001570625_01439 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.999 |
DDZ44_02335 | lpdA | GCA_001570625_01442 | GCA_001570625_01444 | Unannotated protein. | Unannotated protein. | 0.959 |
DDZ44_02350 | DDZ44_02335 | GCA_001570625_01445 | GCA_001570625_01442 | Unannotated protein. | Unannotated protein. | 0.682 |
DDZ44_02350 | GCA_001570625_02711 | GCA_001570625_01445 | GCA_001570625_02711 | Unannotated protein. | Unannotated protein. | 0.975 |
DDZ44_02350 | gcvH | GCA_001570625_01445 | GCA_001570625_01440 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.997 |
DDZ44_02350 | gcvPA | GCA_001570625_01445 | GCA_001570625_01441 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.684 |
DDZ44_02350 | gcvT | GCA_001570625_01445 | GCA_001570625_01439 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.617 |
DDZ44_02350 | lpdA | GCA_001570625_01445 | GCA_001570625_01444 | Unannotated protein. | Unannotated protein. | 0.992 |
DDZ44_02350 | prs | GCA_001570625_01445 | GCA_001570625_00293 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.893 |
DDZ44_07600 | GCA_001570625_00330 | GCA_001570625_00331 | GCA_001570625_00330 | Unannotated protein. | Unannotated protein. | 0.999 |
DDZ44_07600 | GCA_001570625_02711 | GCA_001570625_00331 | GCA_001570625_02711 | Unannotated protein. | Unannotated protein. | 0.603 |
DDZ44_07600 | lpdA | GCA_001570625_00331 | GCA_001570625_01444 | Unannotated protein. | Unannotated protein. | 0.879 |
GCA_001570625_00330 | DDZ44_07600 | GCA_001570625_00330 | GCA_001570625_00331 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_001570625_00330 | GCA_001570625_02711 | GCA_001570625_00330 | GCA_001570625_02711 | Unannotated protein. | Unannotated protein. | 0.552 |
GCA_001570625_00330 | lpdA | GCA_001570625_00330 | GCA_001570625_01444 | Unannotated protein. | Unannotated protein. | 0.881 |
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