STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDZ44_00485Unannotated protein; Belongs to the peptidase S41A family. (497 aa)    
Predicted Functional Partners:
DDZ44_00475
Unannotated protein.
   
   0.718
DDZ44_00470
Unannotated protein.
     
 0.660
map-2
Unannotated protein; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
     
 0.621
DDZ44_04510
Unannotated protein.
    
  0.593
GCA_001570625_00021
Unannotated protein.
   
  0.587
GCA_001570625_00205
Unannotated protein.
   
  0.587
DDZ44_10630
Unannotated protein.
   
  0.587
GCA_001570625_01234
Unannotated protein.
   
  0.587
GCA_001570625_01432
Unannotated protein.
   
  0.587
GCA_001570625_01434
Unannotated protein.
   
  0.587
Your Current Organism:
Syntrophomonas wolfei methylbutyratica
NCBI taxonomy Id: 378794
Other names: CGMCC 1.5051, JCM 14075, S. wolfei subsp. methylbutyratica, Syntrophomonas wolfei subsp. methylbutyratica, strain 4J5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.