STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDZ44_09735Unannotated protein. (671 aa)    
Predicted Functional Partners:
GCA_001570625_00100
Unannotated protein.
    
 0.771
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
     
 0.739
GCA_001570625_02868
Unannotated protein.
    
 0.717
DDZ44_08730
Unannotated protein.
 
 
 0.716
GCA_001570625_02148
Unannotated protein.
  
  
 0.698
GCA_001570625_02715
Unannotated protein.
  
 
 0.692
DDZ44_06430
Unannotated protein.
   
 
 0.630
DDZ44_04235
Unannotated protein.
     
 0.625
DDZ44_10400
Unannotated protein.
  
 
 0.623
gatA
Unannotated protein; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
    
 0.618
Your Current Organism:
Syntrophomonas wolfei methylbutyratica
NCBI taxonomy Id: 378794
Other names: CGMCC 1.5051, JCM 14075, S. wolfei subsp. methylbutyratica, Syntrophomonas wolfei subsp. methylbutyratica, strain 4J5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.