Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO68000.1BNR/Asp-box repeat domain protein. (338 aa)    
Predicted Functional Partners:
ADO74151.1
Uncharacterized protein.
  
     0.707
ADO73475.1
Plant virus icosahedral capsid family protein.
  
     0.672
ADO73132.1
Uncharacterized protein.
  
     0.594
ADO73854.1
Conserved uncharacterized protein.
  
     0.551
ADO76088.1
RES family protein.
  
     0.533
ADO68001.1
Uncharacterized protein.
       0.512
ADO74578.1
Uncharacterized protein.
  
     0.509
pop
Prolyl oligopeptidase family protein.
  
     0.507
ADO71030.1
Oligopeptide transporter.
  
     0.502
ADO68414.1
Hydrolase.
  
     0.494
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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