STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO68135.1S-adenosyl-L-methionine: L-methionine S-methyltransferase. (1021 aa)    
Predicted Functional Partners:
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
  
 
 0.856
mtsA
MtsA protein.
 
     0.780
mtsD
MtsD protein involved in cell-cell cohesion.
  
    0.762
ADO69758.1
Tetratricopeptide repeat protein.
 
     0.755
ADO69759.1
Conserved uncharacterized protein.
 
    0.755
ADO71248.1
Conserved uncharacterized protein.
 
     0.751
mtsE
MtsE protein involved in cell-cell cohesion.
  
    0.746
ADO74005.1
Conserved uncharacterized protein.
 
  
 0.724
ADO75436.1
Restriction endonuclease-like protein.
  
     0.721
mtsB
MtsB protein involved in cell-cell cohesion.
  
    0.714
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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