STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO68342.1Conserved uncharacterized protein. (413 aa)    
Predicted Functional Partners:
ADO71943.1
Amidase family protein.
    
  0.903
ADO69464.1
Amidase family protein; Belongs to the amidase family.
    
  0.902
ADO68588.1
Phenylacetate-CoA ligase.
     
  0.900
ADO73853.1
Phenylacetate-CoA ligase.
     
  0.900
ADO73855.1
Coenzyme f390 synthetase.
     
  0.900
ADO68339.1
Conserved uncharacterized protein.
 
     0.888
ADO68344.1
Radical SAM domain protein.
 
     0.815
ADO68346.1
Conserved uncharacterized protein.
 
     0.800
csd
Selenocysteine lyase.
 
     0.744
ADO74127.1
Conserved uncharacterized protein.
  
     0.728
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.