STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO68713.1Virulence-associated protein E. (768 aa)    
Predicted Functional Partners:
ADO68714.1
Modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.774
ADO68712.1
Phage related protein.
       0.773
ADO73916.1
Conserved uncharacterized protein.
 
     0.764
ADO71584.1
Phage major capsid protein, HK97.
 
     0.763
ADO68706.1
Phage prohead-like protein.
 
     0.758
ADO70458.1
Conserved uncharacterized protein.
 
     0.754
ADO70386.1
PBS lyase HEAT-like repeat protein.
  
     0.751
ADO70354.1
Conserved uncharacterized protein.
 
     0.748
ADO70915.1
Conserved uncharacterized protein.
  
     0.745
ADO68761.1
Conserved uncharacterized protein.
  
     0.744
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.